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duck-agent

DuckDB file discovery agent with verified absolute paths

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SKILL.md

Full skill instructions

Duck Agent

Quick access to all DuckDB databases and code libraries in IES.

Primary Databases (verified Dec 26, 2025)

PathSizePurpose
/​Users/​bob/​ies/​hatchery.duckdb492MMaster hatchery index
/​Users/​bob/​ies/​hatchery_analysis.duckdb210MHatchery analysis results
/​Users/​bob/​ies/​ananas.duckdb108MMusic database
/​Users/​bob/​ies/​music-topos/​gh_interactome.duckdb67MGitHub interactome
/​Users/​bob/​ies/​openai_world.duckdb42MOpenAI integration
/​Users/​bob/​ies/​music-topos/​interaction_entropy.duckdb5.5MEntropy tracking
/​Users/​bob/​ies/​hatchery_order.duckdb536KHatchery ordering

Hatchery Series

/​Users/​bob/​ies/​hatchery_order.duckdb
/​Users/​bob/​ies/​hatchery_measure.duckdb
/​Users/​bob/​ies/​hatchery_geometry.duckdb
/​Users/​bob/​ies/​hatchery_analysis.duckdb
/​Users/​bob/​ies/​hatchery_algebra.duckdb
/​Users/​bob/​ies/​hatchery_topology.duckdb
/​Users/​bob/​ies/​hatchery_probability.duckdb
/​Users/​bob/​ies/​hatchery_logic.duckdb
/​Users/​bob/​ies/​hatchery_category.duckdb
/​Users/​bob/​ies/​hatchery_acsets.duckdb

Code Libraries

/​Users/​bob/​ies/​tools/​duckdb_utils.py                           # 385 lines - Primary skill ecosystem interface
/​Users/​bob/​ies/​music-topos/​lib/​exa_research_duckdb.py          # 593 lines - Production ingestion pipeline
/​Users/​bob/​ies/​music-topos/​lib/​ducklake_incremental_sync.py    # 902 lines - Incremental sync

Quick CLI

# List all tables in hatchery
duckdb /​Users/​bob/​ies/​hatchery.duckdb -c "SHOW TABLES;"

# Query GitHub interactome
duckdb /​Users/​bob/​ies/​music-topos/​gh_interactome.duckdb -c "SELECT * FROM repos LIMIT 10;"

# Check interaction entropy
duckdb /​Users/​bob/​ies/​music-topos/​interaction_entropy.duckdb -c "SELECT COUNT(*) FROM interactions;"

Scientific Skill Interleaving

This skill connects to the K-Dense-AI/​claude-scientific-skills ecosystem:

Graph Theory

  • networkx [○] via bicomodule
    • Universal graph hub

Bibliography References

  • general: 734 citations in bib.duckdb

Cat# Integration

This skill maps to Cat# = Comod(P) as a bicomodule in the equipment structure:

Trit: 0 (ERGODIC)
Home: Prof
Poly Op: ⊗
Kan Role: Adj
Color: #26D826

GF(3) Naturality

The skill participates in triads satisfying:

(-1) + (0) + (+1) ≡ 0 (mod 3)

This ensures compositional coherence in the Cat# equipment structure.