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Evaluation Methods for Agent Systems

evaluation

Evaluate agent systems with quality gates and LLM-as-judge. Use when you need to measure component quality or implement quality gates. Not for simple unit testing or binary pass/fail checks without nuance.

SKILL.md

Full skill instructions

Evaluation Methods for Agent Systems

<mission_control> <objective>Build quality gates and measure component quality using outcome-focused evaluation that accounts for non-determinism and multiple valid paths</​objective> <success_criteria>Multi-dimensional rubric implemented with weighted scoring, evidence requirements, and threshold-based quality gates</​success_criteria> </​mission_control>

<trigger>When building quality gates, measuring component quality, or implementing LLM-as-judge. Not for: Simple unit testing or binary pass/​fail checks without nuance.</​trigger>

<interaction_schema> DEFINE_RUBRIC → BUILD_TEST_SET → IMPLEMENT_EVALUATION → TRACK_METRICS </​interaction_schema>

Agent evaluation requires outcome-focused approaches that account for non-determinism and multiple valid paths. A robust framework enables continuous improvement, catches regressions, and validates that context engineering choices achieve intended effects.

Core Concepts

The 95% Finding

Research on BrowseComp evaluation (which tests browsing agents' ability to locate hard-to-find information) found three factors explain 95% of performance variance:

FactorVariance ExplainedImplication
Token usage80%More tokens = better performance
Number of tool calls~10%More exploration helps
Model choice~5%Better models multiply efficiency

Critical Insight: Model upgrades often provide larger gains than doubling token budgets. Claude Sonnet 4.5 > 2× tokens on previous Sonnet.

Evaluation Challenges

Non-Determinism and Multiple Valid Paths

  • Agents may take different valid paths to goals
  • Traditional evaluations checking specific steps fail
  • Solution: Outcome-focused evaluation judging results, not paths

Context-Dependent Failures

  • Success on simple queries ≠ success on complex ones
  • Failures emerge only after extended interaction
  • Solution: Test across complexity levels, include extended interactions

Composite Quality Dimensions

  • Agent quality is multi-dimensional
  • Includes: factual accuracy, completeness, coherence, tool efficiency
  • Solution: Multi-dimensional rubrics with appropriate weighting

Evaluation Framework

Multi-Dimensional Rubrics

Design Principles:

  • Cover key quality dimensions
  • Use descriptive levels (excellent, good, fair, poor, failed)
  • Convert to numeric scores (0.0 to 1.0)
  • Weight dimensions based on use case

Core Dimensions:

Factual Accuracy

  • Claims match ground truth
  • 1.0: All facts correct, no hallucinations
  • 0.7: Mostly correct, minor inaccuracies
  • 0.5: Mixed accuracy, some errors
  • 0.3: Many errors, significant inaccuracies
  • 0.0: Mostly false, major hallucinations

Completeness

  • Output covers all requested aspects
  • 1.0: Addresses all requirements comprehensively
  • 0.7: Covers most requirements with minor gaps
  • 0.5: Partial coverage, missing some aspects
  • 0.3: Minimal coverage, many gaps
  • 0.0: Fails to address core requirements

Portability (Seed System Specific)

  • Component works without external dependencies
  • 1.0: Zero dependencies, self-contained, portable
  • 0.7: Minimal dependencies, mostly portable
  • 0.5: Some dependencies, requires configuration
  • 0.3: Many dependencies, limited portability
  • 0.0: Tightly coupled, non-portable

Context Efficiency (Seed System Specific)

  • Uses context optimally (progressive disclosure)
  • 1.0: Excellent use of progressive disclosure, minimal context
  • 0.7: Good context management, some optimization
  • 0.5: Adequate context usage, could be improved
  • 0.3: Inefficient context usage, verbose
  • 0.0: Wasteful context usage, bloats prompts

Tool Efficiency

  • Uses appropriate tools reasonable number of times
  • 1.0: Optimal tool selection, minimal calls
  • 0.7: Good tool usage, slightly inefficient
  • 0.5: Adequate tool usage, some redundancy
  • 0.3: Inefficient tool usage, many redundant calls
  • 0.0: Poor tool selection, excessive calls

Scoring System

Individual Dimension Scores: 0.0 to 1.0 for each dimension

Weighted Overall Score:

overall_score = sum(score[dim] * weight[dim] for dim in dimensions)

Pass Threshold: Set based on use case

  • Production components: ≥ 0.8
  • Development components: ≥ 0.7
  • Experimental: ≥ 0.6

LLM-as-Judge Pattern

Direct Scoring

  • Evaluate against weighted criteria with rubrics
  • Provide clear task description
  • Include agent output and ground truth (if available)
  • Request structured judgment with evidence

Prompt Template:

Task: [Description]
Agent Output: [Output]
Evaluation Criteria: [Rubric]

Evaluate the agent output on each dimension:
1. Factual Accuracy (0.0-1.0): [Score] - [Evidence]
2. Completeness (0.0-1.0): [Score] - [Evidence]
3. Portability (0.0-1.0): [Score] - [Evidence]
4. Context Efficiency (0.0-1.0): [Score] - [Evidence]
5. Tool Efficiency (0.0-1.0): [Score] - [Evidence]

Overall Score: [Weighted average]
Pass/​Fail: [Threshold-based]

Pairwise Comparison

  • Compare two outputs with position bias mitigation
  • Automatically swap positions to reduce bias
  • Ask judge to choose better overall output

Position Swapping:

def evaluate_pairwise(output_a, output_b):
    # First comparison: A vs B
    result_1 = judge_evaluate(output_a, output_b)

    # Second comparison: B vs A (swapped)
    result_2 = judge_evaluate(output_b, output_a)

    # Combine results
    return reconcile_comparisons(result_1, result_2)

Evaluation Methods

Test Set Design

Sample Selection

  • Start small during development (dramatic impacts early)
  • Sample from real usage patterns
  • Add known edge cases
  • Ensure coverage across complexity levels

Complexity Stratification

  • Simple: Single tool call, clear requirements
  • Medium: Multiple tool calls, some ambiguity
  • Complex: Many tool calls, significant ambiguity
  • Very Complex: Extended interaction, deep reasoning

Context Engineering Evaluation

Testing Context Strategies

  • Run with different context strategies on same test set
  • Compare quality scores, token usage, efficiency metrics
  • Validate progressive disclosure effectiveness

Degradation Testing

  • Test at different context sizes
  • Identify performance cliffs
  • Establish safe operating limits

Continuous Evaluation

Evaluation Pipeline

  • Run automatically on component changes
  • Track results over time
  • Compare versions to identify improvements/​regressions

Production Monitoring

  • Sample interactions in production
  • Evaluate randomly
  • Set alerts for quality drops

Practical Implementation

Building Evaluation Frameworks

Step 1: Define quality dimensions relevant to use case Step 2: Create rubrics with clear level descriptions Step 3: Build test sets from real patterns and edge cases Step 4: Implement automated evaluation pipelines Step 5: Establish baseline metrics before changes Step 6: Run evaluations on all significant changes Step 7: Track metrics over time Step 8: Supplement with human review

Example: Component Evaluation

def evaluate_component(component, test_set):
    """Evaluate a Seed System component"""

    rubric = {
        "factual_accuracy": {"weight": 0.25},
        "completeness": {"weight": 0.25},
        "portability": {"weight": 0.25},
        "context_efficiency": {"weight": 0.15},
        "tool_efficiency": {"weight": 0.10}
    }

    scores = {}
    for test in test_set:
        result = run_test(component, test)
        for dimension in rubric:
            scores[dimension] = assess_dimension(result, dimension)

    overall = weighted_average(scores, rubric)
    passed = overall >= 0.7

    return {
        "passed": passed,
        "scores": scores,
        "overall": overall,
        "threshold": 0.7
    }

Avoiding Evaluation Pitfalls

❌ Overfitting to specific paths

  • Evaluate outcomes, not specific steps

❌ Ignoring edge cases

  • Include diverse test scenarios

❌ Single-metric obsession

  • Use multi-dimensional rubrics

❌ Neglecting context effects

  • Test with realistic context sizes

❌ Skipping human evaluation

  • Automated evaluation misses subtle issues

Enhanced Validation Workflow

Phase 1: Component Generation

  • Generate component using meta-skills
  • Apply progressive disclosure principles
  • Optimize context usage

Phase 2: Multi-Dimensional Evaluation

  • Run through evaluation framework
  • Score on all 5 dimensions
  • Calculate weighted overall score

Phase 3: Quality Gate

  • Block if below threshold (e.g., 0.7)
  • Provide detailed feedback
  • Suggest improvements

Phase 4: Evidence Collection

  • Store evaluation results
  • Track metrics over time
  • Enable regression detection

Example: Validation Report

# Validation Report
component: my-skill
timestamp: 2026-01-26
overall_score: 0.82
threshold: 0.70
passed: true

dimensions:
  factual_accuracy: 0.90
    evidence: "All technical claims verified"
  completeness: 0.85
    evidence: "Covers all requirements with minor gaps"
  portability: 0.80
    evidence: "Self-contained, zero external dependencies"
  context_efficiency: 0.75
    evidence: "Good progressive disclosure, some optimization possible"
  tool_efficiency: 0.85
    evidence: "Optimal tool selection, minimal redundant calls"

recommendations:
  - "Consider further context optimization for large components"
  - "Add more examples to references/"

Guidelines

  1. Judge outcomes, not paths - Multiple valid routes to goals
  2. Use multi-dimensional rubrics - Quality is composite
  3. Test across complexity levels - Simple ≠ Complex
  4. Implement position swapping - Mitigate pairwise bias
  5. Require evidence - Justify all scores
  6. Track over time - Detect regressions
  7. Combine automated and human - Catch what automation misses
  8. Test context strategies - Validate progressive disclosure

References

<routing_table> Skills referenced for related evaluation capabilities.

When You Need To...Use This SkillRouting Command
Implement progressive disclosurefilesystem-contextSkill("filesystem-context")
Validate component qualityquality-standardsSkill("quality-standards")
Build evaluation rubrics and scoring(this skill)(current context)

Research References:

  • BrowseComp evaluation on performance drivers
  • Eugene Yan on LLM-evaluators
  • Position bias in pairwise comparison

Key Principle: Evaluation should be outcome-focused, multi-dimensional, and continuously validated. Judge whether components achieve right outcomes while following reasonable processes. </​routing_table>


Genetic Code

This component carries essential Seed System principles for context: fork isolation:

<critical_constraint> MANDATORY: All components MUST be self-contained (zero .claude/​rules dependency) MANDATORY: Achieve 80-95% autonomy (0-5 AskUserQuestion rounds per session) MANDATORY: Description MUST use What-When-Not format in third person MANDATORY: No component references another component by name in description MANDATORY: Progressive disclosure - references/ for detailed content MANDATORY: Use XML for control (mission_control, critical_constraint), Markdown for data No exceptions. Portability invariant must be maintained. </​critical_constraint>

Delta Standard: Good Component = Expert Knowledge − What Claude Already Knows

Recognition Questions:

  • "Would Claude know this without being told?" → Delete (zero delta)
  • "Can this work standalone?" → Fix if no (non-self-sufficient)
  • "Did I read the actual file, or just see it in grep?" → Verify before claiming MANDATORY: Use multi-dimensional rubrics (not single metrics) MANDATORY: Require evidence for all scores MANDATORY: Implement position swapping for pairwise comparisons MANDATORY: Block below threshold (≥0.7 for production) No exceptions. Evaluation without evidence is opinion, not assessment. </​critical_constraint>

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