labarchive-integration
Electronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate with Protocols.io/Jupyter/REDCap, for programmatic ELN workflows.
pufferlib
This skill should be used when working with reinforcement learning tasks including high-performance RL training, custom environment development, vectorized parallel simulation, multi-agent systems, or integration with existing RL environments (Gymnasium, PettingZoo, Atari, Procgen, etc.). Use thi...
Full skill instructions
PufferLib is a high-performance reinforcement learning library designed for fast parallel environment simulation and training. It achieves training at millions of steps per second through optimized vectorization, native multi-agent support, and efficient PPO implementation (PuffeRL). The library provides the Ocean suite of 20+ environments and seamless integration with Gymnasium, PettingZoo, and specialized RL frameworks.
Use this skill when:
PuffeRL is PufferLib's optimized PPO+LSTM training algorithm achieving 1M-4M steps/second.
Quick start training:
# CLI training
puffer train procgen-coinrun --train.device cuda --train.learning-rate 3e-4
# Distributed training
torchrun --nproc_per_node=4 train.py
Python training loop:
import pufferlib
from pufferlib import PuffeRL
# Create vectorized environment
env = pufferlib.make('procgen-coinrun', num_envs=256)
# Create trainer
trainer = PuffeRL(
env=env,
policy=my_policy,
device='cuda',
learning_rate=3e-4,
batch_size=32768
)
# Training loop
for iteration in range(num_iterations):
trainer.evaluate() # Collect rollouts
trainer.train() # Train on batch
trainer.mean_and_log() # Log results
For comprehensive training guidance, read references/training.md for:
Create custom high-performance environments with the PufferEnv API.
Basic environment structure:
import numpy as np
from pufferlib import PufferEnv
class MyEnvironment(PufferEnv):
def __init__(self, buf=None):
super().__init__(buf)
# Define spaces
self.observation_space = self.make_space((4,))
self.action_space = self.make_discrete(4)
self.reset()
def reset(self):
# Reset state and return initial observation
return np.zeros(4, dtype=np.float32)
def step(self, action):
# Execute action, compute reward, check done
obs = self._get_observation()
reward = self._compute_reward()
done = self._is_done()
info = {}
return obs, reward, done, info
Use the template script: scripts/env_template.py provides complete single-agent and multi-agent environment templates with examples of:
For complete environment development, read references/environments.md for:
Achieve maximum throughput with optimized parallel simulation.
Vectorization setup:
import pufferlib
# Automatic vectorization
env = pufferlib.make('environment_name', num_envs=256, num_workers=8)
# Performance benchmarks:
# - Pure Python envs: 100k-500k SPS
# - C-based envs: 100M+ SPS
# - With training: 400k-4M total SPS
Key optimizations:
For vectorization optimization, read references/vectorization.md for:
Build policies as standard PyTorch modules with optional utilities.
Basic policy structure:
import torch.nn as nn
from pufferlib.pytorch import layer_init
class Policy(nn.Module):
def __init__(self, observation_space, action_space):
super().__init__()
# Encoder
self.encoder = nn.Sequential(
layer_init(nn.Linear(obs_dim, 256)),
nn.ReLU(),
layer_init(nn.Linear(256, 256)),
nn.ReLU()
)
# Actor and critic heads
self.actor = layer_init(nn.Linear(256, num_actions), std=0.01)
self.critic = layer_init(nn.Linear(256, 1), std=1.0)
def forward(self, observations):
features = self.encoder(observations)
return self.actor(features), self.critic(features)
For complete policy development, read references/policies.md for:
Seamlessly integrate environments from popular RL frameworks.
Gymnasium integration:
import gymnasium as gym
import pufferlib
# Wrap Gymnasium environment
gym_env = gym.make('CartPole-v1')
env = pufferlib.emulate(gym_env, num_envs=256)
# Or use make directly
env = pufferlib.make('gym-CartPole-v1', num_envs=256)
PettingZoo multi-agent:
# Multi-agent environment
env = pufferlib.make('pettingzoo-knights-archers-zombies', num_envs=128)
Supported frameworks:
For integration details, read references/integration.md for:
scripts/train_template.py as starting pointreferences/training.md for optimizationscripts/env_template.pyreset() and step() methodspufferlib.emulate() or make()references/environments.md for advanced patternsreferences/vectorization.md if neededlayer_init for proper weight initializationreferences/policies.mdreferences/vectorization.md for systematic optimizationtrain_template.py - Complete training script template with:
env_template.py - Environment implementation templates:
training.md - Comprehensive training guide:
environments.md - Environment development guide:
vectorization.md - Vectorization optimization:
policies.md - Policy architecture guide:
integration.md - Framework integration guide:
Start simple: Begin with Ocean environments or Gymnasium integration before creating custom environments
Profile early: Measure steps per second from the start to identify bottlenecks
Use templates: scripts/train_template.py and scripts/env_template.py provide solid starting points
Read references as needed: Each reference file is self-contained and focused on a specific capability
Optimize progressively: Start with Python, profile, then optimize critical paths with C if needed
Leverage vectorization: PufferLib's vectorization is key to achieving high throughput
Monitor training: Use WandB or Neptune to track experiments and identify issues early
Test environments: Validate environment logic before scaling up training
Check existing environments: Ocean suite provides 20+ pre-built environments
Use proper initialization: Always use layer_init from pufferlib.pytorch for policies
# Atari
env = pufferlib.make('atari-pong', num_envs=256)
# Procgen
env = pufferlib.make('procgen-coinrun', num_envs=256)
# Minigrid
env = pufferlib.make('minigrid-empty-8x8', num_envs=256)
# PettingZoo
env = pufferlib.make('pettingzoo-pistonball', num_envs=128)
# Shared policy for all agents
policy = create_policy(env.observation_space, env.action_space)
trainer = PuffeRL(env=env, policy=policy)
# Create custom environment
class MyTask(PufferEnv):
# ... implement environment ...
# Vectorize and train
env = pufferlib.emulate(MyTask, num_envs=256)
trainer = PuffeRL(env=env, policy=my_policy)
# Maximize throughput
env = pufferlib.make(
'my-env',
num_envs=1024, # Large batch
num_workers=16, # Many workers
envs_per_worker=64 # Optimize per worker
)
pip install pufferlib
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