compacter_umls_relational_extraction_adapter_PubMedBERT

Adapter reginaboateng/compacter_umls_relational_extraction_adapter_PubMedBERT for microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext

An adapter for the microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext model that was trained on the umls dataset and includes a prediction head for classification.

This adapter was created for usage with the adapter-transformers library.

Usage

First, install adapter-transformers:

pip install -U adapter-transformers

Note: adapter-transformers is a fork of transformers that acts as a drop-in replacement with adapter support. More

Now, the adapter can be loaded and activated like this:

from transformers import AutoAdapterModel

model = AutoAdapterModel.from_pretrained("microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext")
adapter_name = model.load_adapter("reginaboateng/compacter_umls_relational_extraction_adapter_PubMedBERT", source="hf", set_active=True)

Architecture & Training

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Evaluation results

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Citation

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