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CardioNER.eu_EuroBERT
UMCU/CardioNER.eu_EuroBERT
CardioNER.eu_EuroBERT is a token classification model from UMCU. Use it when you need labels on individual words, such as names. The card lists the license as gpl-3.0.
Trained using CardioNER. Settings Optimizer: AdamW Learning rate: 2e-5, with class-weights Decay rate: 1e-4 batch-size: 16 10-fold stratified CV, with 10 epochs for the statistics below Architecture: EuroBERT + 3-laye…
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At a glance
- Task
- Token Classification
- License
- gpl-3.0
- Model type
- eurobert
- Access
- Public
- Created
- May 19, 2026
- Updated
- Jun 8, 2026
- SHA
- 9b30a5eb
Base models
Datasets
Model card
From the Hugging Face model README
Trained using CardioNER. Settings
- Optimizer: AdamW
- Learning rate: 2e-5, with class-weights
- Decay rate: 1e-4
- batch-size: 16
- 10-fold stratified CV, with 10 epochs for the statistics below
- Architecture: EuroBERT + 3-layer dense head.
- Output: multilabel with probas for DISEASE, MEDICATION, PROCEDURE, SYMPTOM.
- Chunking: centered around the span of interest
Note: for inference we use poetry run python -m cardioner.main --inferency_only.. CardioNER with --pipe=dt4h.
Performance on internal hold-outs
Use with caution/not standalone: performance may be considerably less on external datasets.
Strict
| Category | Precision | Recall | F1 |
|---|---|---|---|
| Micro | 0.706 ± 0.009 | 0.583 ± 0.005 | 0.640 ± 0.004 |
| Macro | 0.745 ± 0.008 | 0.616 ± 0.007 | 0.673 ± 0.008 |
| DISEASE | 0.671 ± 0.009 | 0.562 ± 0.007 | 0.611 ± 0.007 |
| MEDICATION | 0.909 ± 0.009 | 0.749 ± 0.016 | 0.821 ± 0.009 |
| PROCEDURE | 0.734 ± 0.010 | 0.587 ± 0.010 | 0.655 ± 0.007 |
| SYMPTOM | 0.666 ± 0.009 | 0.566 ± 0.009 | 0.611 ± 0.007 |
Relaxed
| Category | Precision | Recall | F1 |
|---|---|---|---|
| Micro | 0.876 ± 0.009 | 0.728 ± 0.007 | 0.796 ± 0.005 |
| Macro | 0.894 ± 0.007 | 0.738 ± 0.009 | 0.809 ± 0.005 |
| DISEASE | 0.872 ± 0.010 | 0.733 ± 0.012 | 0.794 ± 0.007 |
| MEDICATION | 0.955 ± 0.008 | 0.787 ± 0.016 | 0.861 ± 0.011 |
| PROCEDURE | 0.898 ± 0.009 | 0.717 ± 0.010 | 0.797 ± 0.006 |
| SYMPTOM | 0.846 ± 0.009 | 0.720 ± 0.011 | 0.779 ± 0.007 |
- Task
- Token Classification
- Type
- eurobert
- License
- gpl-3.0
- Languages
- ro, it, nl, es, en, cs
- Created
- May 19, 2026
- Updated
- Jun 8, 2026