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Model-Saprot-TM-35M
SaProtHub/Model-Saprot-TM-35M
Model-Saprot-TM-35M is a machine learning model from SaProtHub. Use it for the machine learning task on the model card, and read the license before you ship it in a product. It is set up for peft.
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At a glance
- Library
- peft
- Access
- Public
- Created
- Oct 13, 2024
- Updated
- Dec 23, 2024
- SHA
- 1a08e3cc
Base models
Model card
From the Hugging Face model README
Base model: westlake-repl/SaProt_35M_AF2
Task type: Protein-protein Regression
Model Details
Model Description
<!-- Provide a longer summary of what this model is. -->This model is used to predict TM score give two SA protein pairs.
Model input type
SA sequence pair
Performance
test_loss: 0.0031981547363102436
test_spearman: 0.8464066386222839
test_R2: 0.8718534111976624
test_pearson: 0.9338204860687256
LoRA config
lora_dropout: 0.0
lora_alpha: 16
target_modules: ["query", "key", "value", "intermediate.dense", "output.dense"]
modules_to_save: ["classifier"]
Training config
class: AdamW
betas: (0.9, 0.98)
weight_decay: 0.01
learning rate: 1e-4
epoch: 10
batch size: 4
precision: 16-mixed
- PEFT 0.10.0
- Library
- peft
- Created
- Oct 13, 2024
- Updated
- Dec 23, 2024