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BioLinkBERT-base-drugtemist-en-ner
Rodrigo1771/BioLinkBERT-base-drugtemist-en-ner
BioLinkBERT-base-drugtemist-en-ner is a token classification model from Rodrigo1771. Use it when you need labels on individual words, such as names. The card lists the license as apache-2.0.
should probably proofread and complete it, then remove this comment. --
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At a glance
- Task
- Token Classification
- License
- apache-2.0
- Model type
- bert
- Access
- Public
- Created
- Aug 30, 2024
- Updated
- Aug 30, 2024
- SHA
- 2eb63b6e
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Base models
Datasets
Model card
From the Hugging Face model README
<!-- This model card has been generated automatically according to the information the Trainer had access to. You
should probably proofread and complete it, then remove this comment. -->
output
This model is a fine-tuned version of michiyasunaga/BioLinkBERT-base on the Rodrigo1771/drugtemist-en-ner dataset. It achieves the following results on the evaluation set:
- Loss: 0.0056
- Precision: 0.9327
- Recall: 0.9301
- F1: 0.9314
- Accuracy: 0.9987
Model description
More information needed
Intended uses & limitations
More information needed
Training and evaluation data
More information needed
Training procedure
Training hyperparameters
The following hyperparameters were used during training:
- learning_rate: 5e-05
- train_batch_size: 32
- eval_batch_size: 8
- seed: 42
- gradient_accumulation_steps: 2
- total_train_batch_size: 64
- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
- lr_scheduler_type: linear
- num_epochs: 10.0
Training results
| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy |
|---|---|---|---|---|---|---|---|
| No log | 1.0 | 434 | 0.0057 | 0.8938 | 0.8938 | 0.8938 | 0.9981 |
| 0.0182 | 2.0 | 868 | 0.0044 | 0.9024 | 0.9301 | 0.9160 | 0.9985 |
| 0.0039 | 3.0 | 1302 | 0.0045 | 0.9129 | 0.9282 | 0.9205 | 0.9987 |
| 0.0024 | 4.0 | 1736 | 0.0051 | 0.8821 | 0.9348 | 0.9077 | 0.9983 |
| 0.0017 | 5.0 | 2170 | 0.0057 | 0.9251 | 0.9320 | 0.9285 | 0.9986 |
| 0.0012 | 6.0 | 2604 | 0.0061 | 0.9001 | 0.9236 | 0.9117 | 0.9984 |
| 0.0009 | 7.0 | 3038 | 0.0056 | 0.9327 | 0.9301 | 0.9314 | 0.9987 |
| 0.0009 | 8.0 | 3472 | 0.0068 | 0.9118 | 0.9348 | 0.9231 | 0.9986 |
| 0.0006 | 9.0 | 3906 | 0.0072 | 0.9267 | 0.9310 | 0.9289 | 0.9987 |
| 0.0004 | 10.0 | 4340 | 0.0073 | 0.9192 | 0.9329 | 0.9260 | 0.9986 |
Framework versions
- Transformers 4.42.4
- Pytorch 2.4.0+cu121
- Datasets 2.21.0
- Tokenizers 0.19.1
- Task
- Token Classification
- Type
- bert
- License
- apache-2.0
- Created
- Aug 30, 2024
- Updated
- Aug 30, 2024